Anatomy Relevant to the Gastrointestinal System
by Adam Lawson BA, MSc and Terra Doucette Hiller BA, BSN, RN
The gastrointestinal system is important for the absorption of nutrients to provide for cells and growth of the body, as well as to eliminate wastes. The gastrointestinal system provides five functions: ingestion, motility, digestion, absorption and elimination.
Upper Gastrointestinal System
The four main structures of the upper gastrointestinal system include:
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Mouth - performs the first steps of mechanical and chemical digestion.
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Secretions
- Saliva - lubricates and binds food particles in preparation for swallowing. The medulla signals production in the exocrine salivary glands via cranial nerve VII and IX.
- Lingual lipase - secreted by tongue glands and activated by the pH of the stomach to start the digestion of fat. It may ultimately digest up to 30% of the ingested dietary fat.
- Salivary amylase - a component of saliva that breaks down starch.
- IgA antibodies - provides defense against pathogens.
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Function and Motility
- The teeth mechanically break down food into smaller particles. Muscles of mastication reposition the mandible:
- The tongue repositions food within the mouth during mastication and helps convey the resultant bolus into the posterior pharynx. It is composed of several muscles:
- The presence of food or fluid in the pharynx stimulates sensory receptors, and cranial nerve V signals the swallowing center in the medulla. The respiratory center is momentarily suppressed as signals are sent through cranial nerve IX and X to coordinate the movement of food into the esophagus.
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Secretions
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Esophagus
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Secretions
- Mucus - lubricates the passage of the bolus and protects the esophageal wall.
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Function and Motility:
- The esophagus contracts in rhythmic waves to transfer boluses from the mouth to the stomach. Primary peristalsis performs a single rhythmic wave toward the cardiac sphincter. If food or fluid gets caught in the esophagus, secondary peristalsis will continue to rhythmically force the food downward by relaxing the muscle below the distended area.
- The contracted cardiac sphincter prevents food and acid from re-entering the esophagus.
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Secretions
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Stomach
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Secretions
- Gastrin - stimulates the production of hydrochloric acid and pepsinogen.
- Hydrochloric acid (HCl) - denatures proteins
- Intrinsic factor - allows absorption of vitamin B12.
- Pepsinogen - converts to pepsin in the presence of HCl to break down proteins into peptides.
- Mucus - protects the stomach lining from autodigestion.
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Function and Motility
- Peristaltic contractions further mix the food and conduct the gastric contents toward the pylorus.
- The pyloric sphincter prevents backflow of contents from the duodenum back into the stomach. Enzymes released in the duodenum can damage the lining of the mucosal wall of the stomach.
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Secretions
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Duodenum
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Secretions
- Pancreatic enzymes - further breakdown proteins and carbohydrates; degrades fats into fatty acid chains and monoglycerides.
- Bile - emulsifies fat to allow efficient use of the lipase enzyme.
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Function and Motility
- Chyme distends the duodenum and stimulates peristalsis.
- The hepatopancreatic ampulla empties into the duodenum (this will be discussed in more detail later).
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Secretions
Lower Gastrointestinal System
The lower gastrointestinal system comprises the small intestine, large intestine, and anus. It can be subdivided into 5 sections that absorb different nutrients and excrete the waste.
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Jejunum
- Absorption: Amino acids, small peptides, vitamins (B1, B2, niacin, folic Acid, B6, pantothenic acid), and most glucose and fructose.
- Function and Motility: Segmentation contractions of the jejunum further mix digestive enzymes with the chyme and help to expose all molecules to the intestinal mucosa.
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Ileum
- Absorption: Vitamins (C and B12), bile salts, fatty acids and any nutrients which were not absorbed by the jejunum.
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Function and Motility
- Final stages of digestion and absorption of proteins and carbohydrates.
- Peristaltic contractions of longitudinal smooth muscle convey the chyme toward the colon.
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Colon
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Absorption
- Water and potassium are absorbed from chyme in the large intestine.
- Diarrhea reduces absorption time, limiting potassium and water reabsorption; hypokalemia and dehydration may result from severe cases.
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Function and Motility
- The colon contains essential colonies of bacteria which develop over time. Some species produce vitamin K and/or B vitamins. Some species also produce ammonia, which is then absorbed into the bloodstream and converted by the liver into uric acid. An ammonia build-up, due to a dysfunctional liver, may lead to hepatic encephalopathy.
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Absorption
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Rectum
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Function and Motility
- Filling of the rectum triggers the defecation reflex by stimulating stretch receptors in the rectal wall. Afferent nerve fibers send impulses to the lower spinal cord. Reflex signals stimulate somatic motor neurons that innervate the skeletal muscle of the external anal sphincter. Signals are also sent through parasympathetic motor fibers which innervate the sigmoid colon, rectum and internal sphincter.
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Function and Motility
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Anus
- Function and Motility: The external anal sphincter, internal anal sphincter and the puborectalis act as a unit to maintain fecal continence.
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The appendix is located in the right lower quadrant.
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Function: Immunological
- The appendix has been found to be rich in lymphoid cells and plays a role in supporting beneficial bacteria in the colon.
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Function: Immunological

(Click to view animation)
Accessory Digestion Organs
There are four organs known as accessory digestion organs:
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Salivary glands - include the parotid glands, submandibular glands, and sublingual gland.
- Function: Saliva produced by these glands enters the mouth via the parotid ducts.
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Liver
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Function
- Bile, which is produced by the liver, collects from the vessels in both lobes and flows into the left and right hepatic ducts.
- The right and left hepatic ducts converge to form the common hepatic duct.
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The common hepatic duct divides into two different ducts:
- Cystic duct - sends bile to the gallbladder for storage
- Bile duct - sends bile to the hepatopancreatic ampulla to drains into the duodenum.
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Function
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Gallbladder
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Function
- The gallbladder releases stored bile when signaled by the duodenum
- Bile releases into the cystic duct, travels to the bile duct, and drains into the duodenum via the hepatopancreatic ampulla.
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Function
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Pancreas
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Function
- The pancreas makes and secretes the enzymes: trypsinogen, chymotrypsin, amylase, and lipase.
- Enzymes flow through the pancreatic duct converges with the bile duct, and drains into the duodenum via the hepatopancreatic ampulla
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Function
Circulation of the Gastrointestinal System
The blood supply to the gastrointestinal system arises from branches of the thoracic aorta and the abdominal aortic artery. The gastrointestinal system's blood supply is larger than any other organ system.
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Esophagus
- The esophageal artery branches off the thoracic aorta and provides blood supply to the esophagus.
- Blood is mostly drained from the esophagus through the esophageal veins; drainage continues through the azygos and hemiazygos veins into the inferior and superior vena cava.
- The interior esophagus is drained by the superficial veins into the left gastric vein before reaching the portal vein.
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Celiac Trunk Blood Supply
- The celiac trunk consists of the left gastric artery, the common hepatic artery and the splenic artery. These arteries perfuse the liver, spleen, gallbladder, duodenum, stomach, and the lower esophagus.
- Branches from the common hepatic artery form capillary beds which drain into the portal vein. Blood continues to the hepatic vein followed by the inferior vena cava.
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Mesenteric Arteries
- The superior mesenteric artery branches off the abdominal aorta and perfuses the small intestine.
- The inferior mesenteric artery branches off the abdominal aorta and perfuses the descending colon, sigmoid colon, and rectum.